Analysis Edition - Whole Transcriptome

	GeneSifter® Overview
	Analysis Edition
		Microarrays
		NGS Digital gene Expression
		NGS Whole Transcriptome Analysis
		NGS Small RNA Analysis
	Lab Edition
	FinchTV

GeneSifter® Analysis Edition:
Whole Transcriptome Analysis using Next Generation Sequencing

Global profiling
See the complexity of RNA expression beyond the gene level and in to the transcript variant level with a genome-wide, quantitative, base by base analysis of the RNAs in your sample(s). For known genes, exon usage and splice event data are presented in an easy to view list with integrated genome browser (Figure 1). Potentially novel RNAs are also presented in an easy to view list with integrated genome browser allowing you to begin qualifying whether novel RNAs represent novel genes, extensions of UTRs, etc. Altogether, the whole transcriptome analysis pipeline gives you the confidence to identify known transcript variants expressed and potentially novel RNA species in your sample(s).

Intuitive Reporting

	Alignment Statistics Number of reads mapped to each references Number of mistaches
	Known Gene Report Expression values for identified genes Total reads, RPM, RPKM Thumbnail coverage map linked to integrated gene viewer Live links to Entrez gene and other annotation
	Novel Gene Report Expression values for potentially novel transcripionally active regions Genome coordinates Integrated genome viewer
	Novel Splicing Report List of gene with potentaiily novel splicing events Integrated gene viewer for visualization of splicing events
	Filter Report Expression values (Reads, RPM, RPKM) Integrated Gene viewer

Contact us for more information or to find out how Geospiza can help with your analysis or lab automation. 877.Web.Gene or info@geospiza.com or Request More Info

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Webinars:

Gene Expression Profiling in Cancer Research: Microarrays, Tag Profiling and Whole Transcriptome Analysis

RNA-Seq: Global Profiling of Gene Activity and Alternative Splicing

Gene Expression Profiling: from Raw Data to Biological Significance

GeneSifter® Analysis Edition: Whole Transcriptome Analysis using Next Generation Sequencing

Webinars:

Gene Expression Profiling in Cancer Research: Microarrays, Tag Profiling and Whole Transcriptome Analysis

GeneSifter® Analysis Edition:
Whole Transcriptome Analysis using Next Generation Sequencing