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FinchTV is the must have tool for anyone
working with DNA sequence data. It is used to read
chromatogram files from the most popular formats. Simply
drag and drop AB1 or SCF files, even those compressed
with gzip, into the viewing window to display a multi-color
sequence. FinchTV also displays quality values, when
available, and can adjust the scale in both vertical
and horizontal directions in both single and multipane
views.
With FinchTV, you can print your data, edit your data, export FASTA
sequences to your favorite programs, and see all the details stored
in your sequence files.
Advance your Research Now by using Geospiza Finch Suite with FinchTV as a Client:
Reverse Complement
View
the reverse complement of your trace and sequence.
Quickly convert between views using the reverse complement
button in the toolbar.
View
Raw Data
FinchTV is the only free trace
viewer that lets you get to the true source
of your data. With AB1 files, you can view
the raw data and use this data to troubleshoot
your sequencing instruments. |
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Edit
Sequences
Need to change a few bases? Replace
a region with N's, or X's? No problem! FinchTV's
editing features provide lots of power and
include unlimited undo and redo functions between
saves. |
Search
Using Regular Expressions
FinchTV's search engine is the
most advanced of any trace viewer today. It
accepts regular expressions, allowing flexible
searching for sequence patterns. Also, highlighted
regions of data can be copied and pasted into
your favorite applications and database search
tools. For example, try this regular expression
to find an open reading frame:
ATG((?!TAG|TAA|TGA)...)+(TAG|TAA|TGA) |
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Launch
BLAST Searches
After you find that perfect open
reading frame, you might want to know if it
matches anything in the NCBI database. Use
FinchTV to easily launch a BLAST search. All
of the nucleotide based programs, BLASTN, BLASTX,
TBLASTX and megaBLAST are supported.
And that's not all! To learn
more about FinchTV's great features check out
the on
line user manual. |
Save Edits Back into Finch Suite
FinchTV as a Client enables Finch Suite users to easily view and edit sequencing data in a graphical user interface while at the same time allowing the user to save this edited data back into Finch Suite. FinchTV as a Client features.
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Home | More on FinchTV as a Client | Download Version 1.4 Now | Affiliates
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