Geospiza employees are in bold type
Development of a software program to dynamically create
repetitive element databases for RepeatMasker
Arian Smit 1, Robert Hubley1, Todd M. Smith2.
1. Institute for Systems Biology,
2. Geospiza, Inc. Seattle WA.
2005 Plant and Animal Genomics Conference |
 2.8 MB |
rPhrap - A Modern Phrap Assembler
Christie Robertson1, Gary Montry2, and Todd M. Smith1
1. Geospiza, Inc., 2442 NW Market St., Seattle, WA 98107 USA
2. Southwest Parallel Software, Albuquerque, NM
GSAC 2004 DNA Sequencing and Analysis Conference |
4.3 MB |
Using Sequence Metadata to Improve Assembly
Christie Robertson1, Gary Montry2, Mon-Chaio Lo1, Sandra Porter1, Todd Smith1
1. Geospiza, Inc., Seattle, WA
2. Southwest Parallel Software, Albuquerque, NM
2004 Plant and Animal Genome XII Conference |
1.3
MB |
Linea, A New Assembly
System
Mon-Chaio Lo1, Gary Montry2, Christie Robertson1, Todd Smith1
1. Geospiza, Inc., Seattle, WA
2. Southwest Parallel Software, Albuquerque, NM
2004 Plant and Animal Genome XII Conference |
768
kb |
Teaching Undergraduate Biology With Bioinformatics
Sandra Porter1, Linnea Fletcher2,
Stephanie Tatem Murphy3, Rebecca Pearlman4,
Jeannette Staheli1, and Elaine Johnson5
1. Geospiza, Inc., Seattle, WA
2. Austin Community College, Austin, TX
3. University of California, Davis, Davis, CA
4. Johns Hopkins University, Baltimore, MD
5. City College of San Francisco, San Francisco, CA
2003 BISTI Symposium on Digital Biology |
25
MB |
Assembly Improvements Using
Sequence Metadata
Christie Robertson1, Gary Montry2, Mon-Chaio Lo1, Joe Slagel, and Todd
M. Smith1
1. Geospiza, Inc., 2442 NW Market St., Seattle, WA 98107 USA
2. Southwest Parallel Software, Albuquerque, NM
2003 Genome Sequencing and Analysis Conference. |
988
kb |
Second Generation DNA Alignment
Tools
Christie Robertson, Eric Flynn, Gary Montry, Sandra
Porter, Todd M.
Smith
Recomb 2003 DNA Sequencing Technologies and Computation |
492
kb |
Detection of Alternative Splicing
with Phrap
Sandra Porter, Mark Dilger, Christie
Robertson, Todd M. Smith,
and Joe Slagel
2003 Plant and Animal Genomics Conference |
800
kb |
Analysis of DNA Library and
Sequence Quality with the Finch®-Server
Todd M. Smith, Joe Slagel, Dave Campbell, Sandra
Porter
2002 ABRF Conference |
680
kb |
SNP Discovery With the Finch-Server
Todd
Smith and Sandra Porter. Geospiza, Inc.
2001 Genome Sequencing and Analysis Conference. |
348
kb |
Analysis of Publicly Available
Expressed Sequence Tags (ESTs) in the Finch™-Server
Todd M. Smith1,
Burak Eroglu2, Joe Slagel1, Dave Campbell1,
and Peter Nelson2
1. Geospiza, Inc.
2. Fred Hutchinson Cancer Research Center
2000 Genome Sequencing and Analysis Conference |
348
kb |
Geospiza, Inc.
Todd Smith.
1999 Genome Sequencing and Analysis Conference |
548
kb |
Is the HIV-TAR binding protein,
TRP-185, an RNA Methyltransferase?
Todd Smith. Geospiza,
Inc.
1998 Hilton Head Conference |
32
kb |
Statistical Process Control
in DNA Sequencing Using the Finch™-Chromatogram Server
Chris Abajian, Joe
Slagel, and Todd Smith. Geospiza, Inc.
1998 Genome Sequencing and Analysis Conference |
280
kb |
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